Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.21203/rs.3.rs-141578/v1

https://doi.org/10.21203/rs.3.rs-141578/v1

COVID-19 ARDS is characterized by a dysregulated host response that differs from cytokine storm and is modified by dexamethasone

Cited by: 14
Author(s): Aartik Sarma, Stephanie A. Christenson, Eran Mick, Thomas Deiss, Catherine DeVoe, Angela Oliveira Pisco, Rajani Ghale, Alejandra Jauregui, Ashley Byrne, Farzad Moazed, Natasha Spottiswoode, Pratik Sinha, Beth Shoshana Zha, Norma Neff, Michelle Tan, Paula Hayakawa Serpa, K. Mark Ansel, Jennifer G. Wilson, Aleksandra Leligdowicz, Emily Seigel, Marina Sirota, Joseph L. DeRisi, Michael A. Matthay, Carolyn M. Hendrickson, Kirsten N. Kangelaris, Matthew F. Krummel, Prescott G. Woodruff, David J. Erle, Carolyn S. Calfee, Charles Langelier
Published: over 3 years ago

Software Mentions 4

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
cran: ashr
Methods for Adaptive Shrinkage, using Empirical Bayes
Papers that mentioned: 12
cran: pheatmap
Pretty Heatmaps
Papers that mentioned: 2,572
pypi: kallisto
The Kallisto software enables the efficient calculation of atomic features that can be used within a quantitative structure-activity relationship (QSAR) approach. Furthermore, several modelling helpers are implemented.
Papers that mentioned: 307