Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.18632/aging.102087

https://doi.org/10.18632/aging.102087

Cited by: 71
Author(s): Zhenyu Song, Chongxi Fan, Zhiyuan Zhuo, Zhe Ma, Wenzhi Li, Gang Chen
Published: almost 5 years ago

Software Mentions 10

bioconductor: GSVA

Gene Set Variation Analysis for microarray and RNA-seq data
Papers that mentioned: 893

bioconductor: limma

Linear Models for Microarray Data
Papers that mentioned: 7,776

bioconductor: OmicCircos

High-quality circular visualization of omics data
Papers that mentioned: 40

bioconductor: RankProd

Rank Product method for identifying differentially expressed genes with application in meta-analysis
Papers that mentioned: 213

cran: ggstatsplot

'ggplot2' Based Plots with Statistical Details
Papers that mentioned: 82

cran: GOplot

Visualization of Functional Analysis Data
Papers that mentioned: 269

cran: pROC

Display and Analyze ROC Curves
Papers that mentioned: 1,740

cran: survminer

Drawing Survival Curves using 'ggplot2'
Papers that mentioned: 1,473

cran: WGCNA

Weighted Correlation Network Analysis
Papers that mentioned: 3,479

pypi: GSVA

Python CLI and module for running the GSVA R bioconductor package with Python Pandas inputs and outputs.
Papers that mentioned: 893