Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1530/ERC-19-0474

https://doi.org/10.1530/ERC-19-0474

A xenograft and cell line model of SDH-deficient pheochromocytoma derived from Sdhb+/− rats

Cited by: 15
Author(s): James F. Powers, Brent Cochran, James D. Baleja, Hadley D. Sikes, Andrew Pattison, Xue Zhang, Inna Lomakin, Annette Shepard-Barry, Karel Pacák, Sun Jin Moon, Troy F. Langford, Kassi T. Stein, Richard W. Tothill, Ying-Bin Ouyang, Arthur S. Tischler
Published: over 4 years ago

Software Mentions 5

bioconductor: ConsensusClusterPlus
ConsensusClusterPlus
Papers that mentioned: 313
bioconductor: edgeR
Empirical Analysis of Digital Gene Expression Data in R
Papers that mentioned: 6,568
bioconductor: MutationalPatterns
Comprehensive genome-wide analysis of mutational processes
Papers that mentioned: 32
cran: circlize
Circular Visualization
Papers that mentioned: 260
pypi: bcbio-nextgen
Best-practice pipelines for fully automated high throughput sequencing analysis
Papers that mentioned: 43