Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.15252/msb.20209819

https://doi.org/10.15252/msb.20209819

Cited by: 17
Author(s): Nader Morshed, William T. Ralvenius, Alexi Nott, L. Ashley Watson, Felicia H. Rodriguez, Leyla Anne Akay, Brian A. Joughin, Ping‐Chieh Pao, Jay Penney, Lauren M. LaRocque, Diego Mastroeni, Li Huei Tsai, Forest M. White
Published: over 3 years ago

Software Mentions 9

bioconductor: DESeq2

Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583

cran: STAR

Spike Train Analysis with R
Papers that mentioned: 5,759

pypi: goatools

Python scripts to find enrichment of GO terms
Papers that mentioned: 24

pypi: matplotlib

Python plotting package
Papers that mentioned: 1,045

pypi: numpy

Fundamental package for array computing in Python
Papers that mentioned: 832

pypi: pandas

Powerful data structures for data analysis, time series, and statistics
Papers that mentioned: 640

pypi: pyproteome

Package for managing proteomics data
Papers that mentioned: 1

pypi: scipy

Fundamental algorithms for scientific computing in Python
Papers that mentioned: 1,071

pypi: seaborn

Statistical data visualization
Papers that mentioned: 283