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An open API service providing mapping between scientific papers and software projects that are mentioned in them.

Papers: 10.15252/msb.20177862

https://doi.org/10.15252/msb.20177862

Comprehensive innate immune profiling of chikungunya virus infection in pediatric cases

Cited by: 53
Author(s): Daniela Michlmayr, Theodore R. Pak, Adeeb Rahman, El ad David Amir, Eun Young Kim, Seunghee Kim‐Schulze, Maria Suprun, Michael G. Stewart, Guajira P. Thomas, Ángel Balmaseda, Li Wang, Jun Zhu, Mayte Suárez‐Fariñas, Steven M. Wolinsky, Andrew Kasarskis, Eva Harris
Published: almost 7 years ago

Software Mentions 9

bioconductor: Biobase
Biobase: Base functions for Bioconductor
Papers that mentioned: 104
Very Likely Science (75)
bioconductor: limma
Linear Models for Microarray Data
Papers that mentioned: 7,776
Very Likely Science (78)
bioconductor: pathview
a tool set for pathway based data integration and visualization
Papers that mentioned: 144
Very Likely Science (100)
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
Very Likely Science (100)
cran: pheatmap
Pretty Heatmaps
Papers that mentioned: 2,572
Very Likely Science (75)
cran: ROCR
Visualizing the Performance of Scoring Classifiers
Papers that mentioned: 596
Very Likely Science (75)
cran: WGCNA
Weighted Correlation Network Analysis
Papers that mentioned: 3,479
Very Likely Science (85)
pypi: HTSeq
A framework to process and analyze data from high-throughput sequencing (HTS) assays
Papers that mentioned: 3,071
Very Likely Science (65)
pypi: kallisto
The Kallisto software enables the efficient calculation of atomic features that can be used within a quantitative structure-activity relationship (QSAR) approach. Furthermore, several modelling helpers are implemented.
Papers that mentioned: 307
Very Likely Science (100)