Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.15252/msb.20145654

https://doi.org/10.15252/msb.20145654

Annotation of genomics data using bidirectional hidden Markov models unveils variations in Pol II transcription cycle

Cited by: 21
Author(s): Benedikt Zacher, Michael Lidschreiber, Patrick Cramer, Julien Gagneur, Achim Tresch
Published: almost 10 years ago

Software Mentions 5

bioconductor: mgsa
Model-based gene set analysis
Papers that mentioned: 5
bioconductor: STAN
The Genomic STate ANnotation Package
Papers that mentioned: 150
bioconductor: tilingArray
Transcript mapping with high-density oligonucleotide tiling arrays
Papers that mentioned: 17
cran: HMM
Hidden Markov Models
Papers that mentioned: 577
pypi: ipopt
A Cython wrapper to the IPOPT optimization package
Papers that mentioned: 1