Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.15252/embr.201744059

https://doi.org/10.15252/embr.201744059

Transposon‐driven transcription is a conserved feature of vertebrate spermatogenesis and transcript evolution

Cited by: 33
Author(s): Matthew P Davis, Claudia Carrieri, Harpreet K. Saini, Stijn van Dongen, Tommaso Leonardi, Giovanni Bussotti, Jack Monahan, Tania Auchynnikava, Angelo Bitetti, Juri Rappsilber, Robin C. Allshire, Alena Shkumatava, Dónal O’Carroll, Anton J. Enright
Published: over 7 years ago

Software Mentions 4

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
pypi: deepTools
Useful tools for exploring deep sequencing data.
Papers that mentioned: 435
pypi: gmap
A package that prints 'Hello, World!'
Papers that mentioned: 64
pypi: HTSeq
A framework to process and analyze data from high-throughput sequencing (HTS) assays
Papers that mentioned: 3,071