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An open API service providing mapping between scientific papers and software projects that are mentioned in them.

Papers: 10.15252/embj.2020106388

https://doi.org/10.15252/embj.2020106388

Unraveling the features of somatic transposition in the <i>Drosophila</i> intestine

Cited by: 25
Author(s): Katarzyna Siudeja, Marius van den Beek, Nick Riddiford, Benjamin Boumard, Annabelle Wurmser, Marine Stefanutti, Sonia Lameiras, Allison J. Bardin
Published: over 4 years ago

Software Mentions 12

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
Very Likely Science (100)
cran: mem
The Moving Epidemic Method
Papers that mentioned: 28
Very Likely Science (99)
cran: meme
Create Meme
Papers that mentioned: 31
Very Likely Science (95)
cran: SAM
Sparse Additive Modelling
Papers that mentioned: 4,566
Very Likely Science (85)
pypi: bwa
Bwa: Simple Notification Sender(Discord, Slack, Gmail and Telegram)
Papers that mentioned: 989
Very Likely Science (65)
pypi: guppy
Guppy-PE -- A Python Programming Environment
Papers that mentioned: 53
Very Likely Science (65)
pypi: ipython
IPython: Productive Interactive Computing
Papers that mentioned: 40
Likely Science (40)
pypi: mappy
Minimap2 python binding
Papers that mentioned: 3
Very Likely Science (100)
pypi: mem
memorize tool
Papers that mentioned: 28
Very Likely Science (65)
pypi: meme
Use the command line to generate memes on memegenerator.co
Papers that mentioned: 31
Very Likely Science (65)
pypi: pybedtools
Wrapper around BEDTools for bioinformatics work
Papers that mentioned: 48
Very Likely Science (100)
pypi: readtagger
Tags reads in a BAM file based on other BAM files.
Papers that mentioned: 1
Very Likely Science (100)