Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1371/journal.ppat.1009418

https://doi.org/10.1371/journal.ppat.1009418

Genomics of an endemic cystic fibrosis Burkholderia multivorans strain reveals low within-patient evolution but high between-patient diversity

Cited by: 10
Author(s): Cédric Lood, Charlotte Peeters, Quentin Lamy-Besnier, Jeroen Wagemans, Daniël De Vos, Marijke Proesmans, Jean‐Paul Pirnay, Fedoua Echahidi, Denis Piérard, M Thimmesch, Anca Boeras, Katrien Lagrou, Evelien De Canck, Elke De Wachter, Vera van Noort, Rob Lavigne, Peter Vandamme
Published: over 3 years ago

Software Mentions 7

cran: UpSetR
A More Scalable Alternative to Venn and Euler Diagrams for Visualizing Intersecting Sets
Papers that mentioned: 319
pypi: hmmer
HMMER binaries.
Papers that mentioned: 196
pypi: NanoFilt
Filtering and trimming of Oxford Nanopore Sequencing data
Papers that mentioned: 124
pypi: PACE
Data Quality of Experimental Data
Papers that mentioned: 13,779
pypi: perl
Perl as a Python package
Papers that mentioned: 604
pypi: PhiSpy
Prophage finder using multiple metrics
Papers that mentioned: 66
pypi: snippy
Snippy is a software development and maintenance notes manager.
Papers that mentioned: 77