Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1371/journal.pone.0219698

https://doi.org/10.1371/journal.pone.0219698

Analysis of gene expression in rheumatoid arthritis and related conditions offers insights into sex-bias, gene biotypes and co-expression patterns

Cited by: 11
Author(s): Alexander Platzer, Thomas Nußbaumer, Thomas Karonitsch, Josef S. Smolen, Daniel Aletaha
Published: over 5 years ago

Software Mentions 12

bioconductor: edgeR
Empirical Analysis of Digital Gene Expression Data in R
Papers that mentioned: 6,568
bioconductor: GOstats
Tools for manipulating GO and microarrays
Papers that mentioned: 368
cran: ape
Analyses of Phylogenetics and Evolution
Papers that mentioned: 918
cran: dplyr
A Grammar of Data Manipulation
Papers that mentioned: 1,213
cran: factoextra
Extract and Visualize the Results of Multivariate Data Analyses
Papers that mentioned: 650
cran: FactoMineR
Multivariate Exploratory Data Analysis and Data Mining
Papers that mentioned: 1,101
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: ggrepel
Automatically Position Non-Overlapping Text Labels with 'ggplot2'
Papers that mentioned: 164
cran: vioplot
Violin Plot
Papers that mentioned: 133
cran: WGCNA
Weighted Correlation Network Analysis
Papers that mentioned: 3,479
pypi: ape
A Productive Environment - make/rake/ant/fab-like system with support for FOSD
Papers that mentioned: 918
pypi: Circos
Circos plots in Python!
Papers that mentioned: 2,252