Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1371/journal.pone.0182507

https://doi.org/10.1371/journal.pone.0182507

A comprehensive simulation study on classification of RNA-Seq data

Cited by: 26
Author(s): Gökmen Zararsız, Dinçer Göksülük, Selçuk Korkmaz, Vahap Eldem, Gözde Ertürk Zararsız, İzzet Paruğ Duru, Ahmet Öztürk
Published: about 7 years ago

Software Mentions 5

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
bioconductor: MLSeq
Machine Learning Interface for RNA-Seq Data
Papers that mentioned: 4
cran: NBLDA
Negative Binomial Linear Discriminant Analysis
Papers that mentioned: 7
cran: PoiClaClu
Classification and Clustering of Sequencing Data Based on a Poisson Model
Papers that mentioned: 12
pypi: HTSeq
A framework to process and analyze data from high-throughput sequencing (HTS) assays
Papers that mentioned: 3,071