Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1371/journal.pone.0132866

https://doi.org/10.1371/journal.pone.0132866

swDMR: A Sliding Window Approach to Identify Differentially Methylated Regions Based on Whole Genome Bisulfite Sequencing

Cited by: 43
Author(s): Zhen Wang, Xianfeng Li, Yi Jiang, Qianzhi Shao, Qi Liu, Bingyu Chen, Dongsheng Huang
Published: over 9 years ago

Software Mentions 7

bioconductor: BiSeq

Processing and analyzing bisulfite sequencing data
Papers that mentioned: 33

bioconductor: bsseq

Analyze, manage and store bisulfite sequencing data
Papers that mentioned: 38

bioconductor: DSS

Dispersion shrinkage for sequencing data
Papers that mentioned: 288

bioconductor: methylMnM

detect different methylation level (DMR)
Papers that mentioned: 4

bioconductor: methylSig

MethylSig: Differential Methylation Testing for WGBS and RRBS Data
Papers that mentioned: 11

cran: gplots

Various R Programming Tools for Plotting Data
Papers that mentioned: 2,122

pypi: browser

A package to prevent Dependency Confusion attacks against Yandex.
Papers that mentioned: 2,125