Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1371/journal.pone.0129350

https://doi.org/10.1371/journal.pone.0129350

Multiplexing of ChIP-Seq Samples in an Optimized Experimental Condition Has Minimal Impact on Peak Detection

Cited by: 0
Author(s): Thadeous J. Kacmarczyk, Caitlin Bourque, Xihui Zhang, Yanwen Jiang, Yariv Houvras, Alicia Alonso, Doron Betel
Published: over 9 years ago

Software Mentions 4

bioconductor: ggbio
Visualization tools for genomic data
Papers that mentioned: 53
bioconductor: Rsamtools
Binary alignment (BAM), FASTA, variant call (BCF), and tabix file import
Papers that mentioned: 138
cran: beeswarm
The Bee Swarm Plot, an Alternative to Stripchart
Papers that mentioned: 52
pypi: MACS2
Model Based Analysis for ChIP-Seq data
Papers that mentioned: 1,203