Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Papers: 10.1371/journal.pone.0084955
https://doi.org/10.1371/journal.pone.0084955
Clustering Gene Expression Regulators: New Approach to Disease Subtyping
Cited by: 30
Author(s): Mikhail A. Pyatnitskiy, Ilya Mazo, Maria Shkrob, Elena Schwartz, Ekaterina Kotelnikova
Published: over 10 years ago
Software Mentions 4
bioconductor: GSVA
Gene Set Variation Analysis for microarray and RNA-seq dataPapers that mentioned: 893
bioconductor: hopach
Hierarchical Ordered Partitioning and Collapsing Hybrid (HOPACH)Papers that mentioned: 7
bioconductor: SPIA
Signaling Pathway Impact Analysis (SPIA) using combined evidence of pathway over-representation and unusual signaling perturbationsPapers that mentioned: 155
pypi: GSVA
Python CLI and module for running the GSVA R bioconductor package with Python Pandas inputs and outputs.Papers that mentioned: 893