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Papers: 10.1371/journal.pone.0084955

https://doi.org/10.1371/journal.pone.0084955

Clustering Gene Expression Regulators: New Approach to Disease Subtyping

Cited by: 30
Author(s): Mikhail A. Pyatnitskiy, Ilya Mazo, Maria Shkrob, Elena Schwartz, Ekaterina Kotelnikova
Published: over 12 years ago

Software Mentions 4

bioconductor: GSVA
Gene Set Variation Analysis for microarray and RNA-seq data
Papers that mentioned: 893
Very Likely Science (100)
bioconductor: hopach
Hierarchical Ordered Partitioning and Collapsing Hybrid (HOPACH)
Papers that mentioned: 7
Very Likely Science (83)
bioconductor: SPIA
Signaling Pathway Impact Analysis (SPIA) using combined evidence of pathway over-representation and unusual signaling perturbations
Papers that mentioned: 155
Very Likely Science (100)
pypi: GSVA
Python CLI and module for running the GSVA R bioconductor package with Python Pandas inputs and outputs.
Papers that mentioned: 893
Very Likely Science (100)