Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1371/journal.pntd.0009321

https://doi.org/10.1371/journal.pntd.0009321

Localized skin inflammation during cutaneous leishmaniasis drives a chronic, systemic IFN-γ signature

Cited by: 15
Author(s): Camila Farias Amorim, Fernanda O. Novais, Ba Tiep Nguyen, Maurício T. Nascimento, Jamile Lago, Alexsandro S. Lago, Lucas P. Carvalho, Daniel P. Beiting, Phillip Scott
Published: over 3 years ago

Software Mentions 11

bioconductor: biomaRt
Interface to BioMart databases (i.e. Ensembl)
Papers that mentioned: 446
bioconductor: GSVA
Gene Set Variation Analysis for microarray and RNA-seq data
Papers that mentioned: 893
bioconductor: sva
Surrogate Variable Analysis
Papers that mentioned: 511
cran: ggpubr
'ggplot2' Based Publication Ready Plots
Papers that mentioned: 856
cran: gprofiler2
Interface to the 'g:Profiler' Toolset
Papers that mentioned: 21
cran: Hmisc
Harrell Miscellaneous
Papers that mentioned: 1,000
cran: PERMANOVA
Multivariate Analysis of Variance Based on Distances and Permutations
Papers that mentioned: 6,292
cran: vegan
Community Ecology Package
Papers that mentioned: 6,903
pypi: GSVA
Python CLI and module for running the GSVA R bioconductor package with Python Pandas inputs and outputs.
Papers that mentioned: 893
pypi: PACE
Data Quality of Experimental Data
Papers that mentioned: 13,779
pypi: stats
Calculator-style statistical functions
Papers that mentioned: 3,105