Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1371/journal.pgen.1009773

https://doi.org/10.1371/journal.pgen.1009773

Transcriptional progression during meiotic prophase I reveals sex-specific features and X chromosome dynamics in human fetal female germline

Cited by: 7
Author(s): Xueying Fan, Ioannis Moustakas, Vanessa Torrens-Juaneda, Qijing Lei, Geert Hamer, Leoni A. Louwé, Gonneke S. K. Pilgram, Károly Szuhai, Roberto Matorras, Cristina Eguizábal, Lucette van der Westerlaken, Hailiang Mei, Susana M. Chuva de Sousa Lopes
Published: over 3 years ago

Software Mentions 9

bioconductor: biomaRt
Interface to BioMart databases (i.e. Ensembl)
Papers that mentioned: 446
cran: Seurat
Tools for Single Cell Genomics
Papers that mentioned: 1,512
pypi: numpy
Fundamental package for array computing in Python
Papers that mentioned: 832
pypi: pandas
Powerful data structures for data analysis, time series, and statistics
Papers that mentioned: 640
pypi: scanpy
Single-Cell Analysis in Python.
Papers that mentioned: 68
pypi: scipy
Fundamental algorithms for scientific computing in Python
Papers that mentioned: 1,071
pypi: scvelo
RNA velocity generalized through dynamical modeling
Papers that mentioned: 9
pypi: seaborn
Statistical data visualization
Papers that mentioned: 283
pypi: velocyto
RNA velocity analysis for single cell RNA-seq data
Papers that mentioned: 25