An open API service providing mapping between scientific papers and software projects that are mentioned in them.

Papers: 10.1371/journal.pgen.1008927

https://doi.org/10.1371/journal.pgen.1008927

On the cross-population generalizability of gene expression prediction models

Cited by: 34
Author(s): Kevin L. Keys, Angel C. Y. Mak, Marquitta J. White, Walter L. Eckalbar, Andrew Dahl, Joel Mefford, Anna V. Mikhaylova, María G. Contreras, Jennifer R. Elhawary, Celeste Eng, Donglei Hu, Scott Huntsman, Sam S. Oh, Sandra Salazar, Michael A. LeNoir, Jimmie C. Ye, Timothy A. Thornton, Noah Zaitlen, Esteban G. Burchard, Christopher R. Gignoux
Published: almost 5 years ago

Software Mentions 16

bioconductor: annotate
Annotation for microarrays
Papers that mentioned: 36
Very Likely Science (100)
bioconductor: biomaRt
Interface to BioMart databases (i.e. Ensembl)
Papers that mentioned: 446
Very Likely Science (100)
bioconductor: preprocessCore
A collection of pre-processing functions
Papers that mentioned: 146
Very Likely Science (100)
cran: argparser
Command-Line Argument Parser
Papers that mentioned: 2
Very Likely Science (75)
cran: assertthat
Easy Pre and Post Assertions
Papers that mentioned: 6
Very Likely Science (83)
cran: doParallel
Foreach Parallel Adaptor for the 'parallel' Package
Papers that mentioned: 90
Very Likely Science (75)
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
Very Likely Science (100)
cran: glmnet
Lasso and Elastic-Net Regularized Generalized Linear Models
Papers that mentioned: 1,607
Very Likely Science (100)
cran: knitr
A General-Purpose Package for Dynamic Report Generation in R
Papers that mentioned: 157
Very Likely Science (75)
cran: optparse
Command Line Option Parser
Papers that mentioned: 15
Very Likely Science (100)
cran: SMR
Externally Studentized Midrange Distribution
Papers that mentioned: 65
Very Likely Science (75)
cran: tidyverse
Easily Install and Load the 'Tidyverse'
Papers that mentioned: 1,023
Very Likely Science (100)
pypi: annotate
Decorator to set a function's __annotations__ like Py3.
Papers that mentioned: 36
Very Likely Science (65)
pypi: glmnet
Python wrapper for glmnet
Papers that mentioned: 1,607
Very Likely Science (100)
pypi: PACE
Data Quality of Experimental Data
Papers that mentioned: 13,779
Very Likely Science (90)
pypi: simulate
HuggingFace community-driven open-source library of simulation environments
Papers that mentioned: 13
Very Likely Science (100)