Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1371/journal.pgen.1008506

https://doi.org/10.1371/journal.pgen.1008506

Cited by: 21
Author(s): Katelyn A. Walzer, Hélène Fradin, Liane Y. Emerson, David L. Corcoran, Jen‐Tsan Chi
Published: over 4 years ago

Software Mentions 7

bioconductor: monocle

Clustering, differential expression, and trajectory analysis for single- cell RNA-Seq
Papers that mentioned: 60

bioconductor: SC3

Single-Cell Consensus Clustering
Papers that mentioned: 71

bioconductor: scran

Methods for Single-Cell RNA-Seq Data Analysis
Papers that mentioned: 113

cran: DDRTree

Learning Principal Graphs with DDRTree
Papers that mentioned: 42

cran: STAR

Spike Train Analysis with R
Papers that mentioned: 5,759

pypi: HTSeq

A framework to process and analyze data from high-throughput sequencing (HTS) assays
Papers that mentioned: 3,071

pypi: monocle

An async programming framework with a blocking look-alike syntax
Papers that mentioned: 60