Papers: 10.1371/journal.pcbi.1009119

https://doi.org/10.1371/journal.pcbi.1009119

De novo mutational signature discovery in tumor genomes using SparseSignatures

Cited by: 21
Author(s): Avantika Lal, Keli Liu, Robert Tibshirani, Arend Sidow, Daniele Ramazzotti
Published: about 5 years ago

Software Mentions 6

bioconductor: signeR
Empirical Bayesian approach to mutational signature discovery
Papers that mentioned: 9
Very Likely Science (100)
bioconductor: SparseSignatures
SparseSignatures
Papers that mentioned: 3
Very Likely Science (100)
cran: deconstructSigs
Identifies Signatures Present in a Tumor Sample
Papers that mentioned: 85
Very Likely Science (100)
cran: NMF
Algorithms and Framework for Nonnegative Matrix Factorization (NMF)
Papers that mentioned: 108
Very Likely Science (100)
cran: nnlasso
Non-Negative Lasso and Elastic Net Penalized Generalized Linear Models
Papers that mentioned: 2
Very Likely Science (75)
cran: nnls
The Lawson-Hanson Algorithm for Non-Negative Least Squares (NNLS)
Papers that mentioned: 8
Very Likely Science (85)