Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1371/journal.pcbi.1008316

https://doi.org/10.1371/journal.pcbi.1008316

Ten simple rules for writing Dockerfiles for reproducible data science

Cited by: 36
Author(s): Daniel Nüst, Vanessa Sochat, Ben Marwick, Stephen J. Eglen, T. Head, Tony Hirst, Benjamin D. Evans
Published: about 4 years ago

Software Mentions 11

cran: git2r

Provides Access to Git Repositories
Papers that mentioned: 4

cran: RColorBrewer

ColorBrewer Palettes
Papers that mentioned: 490

cran: rJava

Low-Level R to Java Interface
Papers that mentioned: 28

cran: RNetCDF

Interface to 'NetCDF' Datasets
Papers that mentioned: 4

pypi: docker

A Python library for the Docker Engine API.
Papers that mentioned: 39

pypi: docker-compose

Multi-container orchestration for Docker
Papers that mentioned: 10

pypi: jupyter

Jupyter metapackage. Install all the Jupyter components in one go.
Papers that mentioned: 39

pypi: jupyter-repo2docker

Repo2docker: Turn code repositories into Jupyter enabled Docker Images
Papers that mentioned: 1

pypi: podman

Bindings for Podman RESTful API
Papers that mentioned: 2

pypi: uszipcode

USA zipcode programmable database, includes 2020 census data and geometry information.
Papers that mentioned: 2

pypi: yml

A fast, safe, pure Python YAML and JSON parser
Papers that mentioned: 12