Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1371/journal.pcbi.1007803

https://doi.org/10.1371/journal.pcbi.1007803

Methodological challenges in translational drug response modeling in cancer: A systematic analysis with FORESEE

Cited by: 9
Author(s): Lisa-Katrin Turnhoff, Ali Hadizadeh Esfahani, Andreas Schuppert
Published: over 4 years ago

Software Mentions 10

bioconductor: biomaRt

Interface to BioMart databases (i.e. Ensembl)
Papers that mentioned: 446

bioconductor: limma

Linear Models for Microarray Data
Papers that mentioned: 7,776

bioconductor: sva

Surrogate Variable Analysis
Papers that mentioned: 511

cran: Binarize

Binarization of One-Dimensional Data
Papers that mentioned: 3

cran: bootnet

Bootstrap Methods for Various Network Estimation Routines
Papers that mentioned: 69

cran: corrplot

Visualization of a Correlation Matrix
Papers that mentioned: 1,077

cran: ggplot2

Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441

cran: pROC

Display and Analyze ROC Curves
Papers that mentioned: 1,740

pypi: ggplot

ggplot for python
Papers that mentioned: 796

pypi: stats

Calculator-style statistical functions
Papers that mentioned: 3,105