Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1371/journal.pcbi.1005187

https://doi.org/10.1371/journal.pcbi.1005187

MinePath: Mining for Phenotype Differential Sub-paths in Molecular Pathways

Cited by: 24
Author(s): Lefteris Koumakis, Alexandros Kanterakis, Evgenia Kartsaki, Maria Chatzimina, Michalis Zervakis, Manolis Tsiknakis, Despoina Vassou, Dimitris Kafetzopoulos, Kostas Marias, Vassilis Moustakis, George Potamias
Published: almost 8 years ago

Software Mentions 5

bioconductor: EnrichmentBrowser
Seamless navigation through combined results of set-based and network-based enrichment analysis
Papers that mentioned: 12
bioconductor: SPIA
Signaling Pathway Impact Analysis (SPIA) using combined evidence of pathway over-representation and unusual signaling perturbations
Papers that mentioned: 155
cran: GSA
Gene Set Analysis
Papers that mentioned: 285
pypi: AltAnalyze
User Friendly Application for Comprehensive Transcriptome Analysis
Papers that mentioned: 102
pypi: GSA
Python Package to implement Gravitational Search Algorithm. Documentation at:https://github.com/deepanshu1999/GSA
Papers that mentioned: 285