Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.12688/wellcomeopenres.10501.2

https://doi.org/10.12688/wellcomeopenres.10501.2

Making the most of RNA-seq: Pre-processing sequencing data with Opossum for reliable SNP variant detection

Cited by: 35
Author(s): Laura Oikkonen, Stefano Lise
Published: over 7 years ago

Software Mentions 8

cran: argparse
Command Line Optional and Positional Argument Parser
Papers that mentioned: 20
cran: itertools
Iterator Tools
Papers that mentioned: 16
cran: Platypus
Single-Cell Immune Repertoire and Gene Expression Analysis
Papers that mentioned: 218
cran: SAM
Sparse Additive Modelling
Papers that mentioned: 4,566
cran: sys
Powerful and Reliable Tools for Running System Commands in R
Papers that mentioned: 10
pypi: argparse
Python command-line parsing library
Papers that mentioned: 20
pypi: Platypus
A minimal language
Papers that mentioned: 218
pypi: TopHat
TopHat Platform
Papers that mentioned: 5,017