Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.12688/f1000research.8967.2

https://doi.org/10.12688/f1000research.8967.2

Cited by: 16
Author(s): Bernd Klaus, Stefanie Reisenauer
Published: almost 6 years ago

Software Mentions 13

bioconductor: ArrayExpress
Access the ArrayExpress Collection at EMBL-EBI Biostudies and build Bioconductor data structures: ExpressionSet, AffyBatch, NChannelSet
Papers that mentioned: 1,962
bioconductor: BiocStyle
Standard styles for vignettes and other Bioconductor documents
Papers that mentioned: 1
bioconductor: limma
Linear Models for Microarray Data
Papers that mentioned: 7,776
bioconductor: oligo
Preprocessing tools for oligonucleotide arrays
Papers that mentioned: 204
bioconductor: topGO
Enrichment Analysis for Gene Ontology
Papers that mentioned: 652
cran: dplyr
A Grammar of Data Manipulation
Papers that mentioned: 1,213
cran: fdrtool
Estimation of (Local) False Discovery Rates and Higher Criticism
Papers that mentioned: 124
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: gplots
Various R Programming Tools for Plotting Data
Papers that mentioned: 2,122
cran: magrittr
A Forward-Pipe Operator for R
Papers that mentioned: 107
pypi: oligo
UNOFFICIAL Python client for i-DE
Papers that mentioned: 204
pypi: pdata

Papers that mentioned: 1
pypi: scanner
Scanner is like Ruby's StringScanner
Papers that mentioned: 32