Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Papers: 10.12688/f1000research.8759.2
https://doi.org/10.12688/f1000research.8759.2
Infrastructure for genomic interactions: Bioconductor classes for Hi-C, ChIA-PET and related experiments
Cited by: 16
Author(s): Aaron T. L. Lun, Malcolm Perry, Elizabeth Ing-Simmons
Published: over 8 years ago
Software Mentions 10
bioconductor: GenomicInteractions
Utilities for handling genomic interaction dataPapers that mentioned: 10
bioconductor: GenomicRanges
Representation and manipulation of genomic intervalsPapers that mentioned: 323
bioconductor: HiTC
High Throughput Chromosome Conformation Capture analysisPapers that mentioned: 21
bioconductor: InteractionSet
Base Classes for Storing Genomic Interaction DataPapers that mentioned: 6
bioconductor: rtracklayer
R interface to genome annotation files and the UCSC genome browserPapers that mentioned: 107
bioconductor: S4Vectors
Foundation of vector-like and list-like containers in BioconductorPapers that mentioned: 7