Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Papers: 10.12688/f1000research.18490.3
https://doi.org/10.12688/f1000research.18490.3
Evaluation of methods to assign cell type labels to cell clusters from single-cell RNA-sequencing data
Cited by: 38
Author(s): J. Javier Díaz-Mejía, Elaine C. Meng, Alexander R. Pico, Sonya A. MacParland, Troy Ketela, Trevor J. Pugh, Gary D. Bader, John H. Morris
Published: about 5 years ago
Software Mentions 7
bioconductor: GSVA
Gene Set Variation Analysis for microarray and RNA-seq dataPapers that mentioned: 893
bioconductor: scmap
A tool for unsupervised projection of single cell RNA-seq dataPapers that mentioned: 34
cran: precrec
Calculate Accurate Precision-Recall and ROC (Receiver Operator Characteristics) CurvesPapers that mentioned: 14
pypi: GSVA
Python CLI and module for running the GSVA R bioconductor package with Python Pandas inputs and outputs.Papers that mentioned: 893