Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.12688/f1000research.10465.1

https://doi.org/10.12688/f1000research.10465.1

Meta-analysis of crowdsourced data compendia suggests pan-disease transcriptional signatures of autoimmunity

Cited by: 5
Author(s): William Lau, Rachel Sparks, John S. Tsang
Published: almost 8 years ago

Software Mentions 5

bioconductor: doppelgangR
Identify likely duplicate samples from genomic or meta-data
Papers that mentioned: 3
bioconductor: GSVA
Gene Set Variation Analysis for microarray and RNA-seq data
Papers that mentioned: 893
bioconductor: RankProd
Rank Product method for identifying differentially expressed genes with application in meta-analysis
Papers that mentioned: 213
bioconductor: ReactomePA
Reactome Pathway Analysis
Papers that mentioned: 171
pypi: GSVA
Python CLI and module for running the GSVA R bioconductor package with Python Pandas inputs and outputs.
Papers that mentioned: 893