Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s41065-021-00196-8

https://doi.org/10.1186/s41065-021-00196-8

Dynamic co-expression modular network analysis in nonalcoholic fatty liver disease

Cited by: 4
Author(s): Jing Zheng, WU Hui-zhong, Zhiying Zhang, Songqiang Yao
Published: over 3 years ago

Software Mentions 9

bioconductor: CEMiTool
Co-expression Modules identification Tool
Papers that mentioned: 31
bioconductor: edgeR
Empirical Analysis of Digital Gene Expression Data in R
Papers that mentioned: 6,568
bioconductor: fgsea
Fast Gene Set Enrichment Analysis
Papers that mentioned: 150
bioconductor: limma
Linear Models for Microarray Data
Papers that mentioned: 7,776
bioconductor: rtracklayer
R interface to genome annotation files and the UCSC genome browser
Papers that mentioned: 107
bioconductor: SummarizedExperiment
SummarizedExperiment container
Papers that mentioned: 52
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: ggridges
Ridgeline Plots in 'ggplot2'
Papers that mentioned: 53
cran: WGCNA
Weighted Correlation Network Analysis
Papers that mentioned: 3,479