Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s40168-017-0325-z

https://doi.org/10.1186/s40168-017-0325-z

Cited by: 71
Author(s): David Casero, Kirandeep Gill, Vijayalakshmi Sridharan, Igor Koturbash, Gregory A. Nelson, Martin Hauer‐Jensen, Marjan Boerma, Jonathan Braun, Amrita K. Cheema
Published: almost 7 years ago

Software Mentions 6

bioconductor: DESeq2

Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583

cran: MBCluster.Seq

Model-Based Clustering for RNA-seq Data
Papers that mentioned: 8

cran: PERMANOVA

Multivariate Analysis of Variance Based on Distances and Permutations
Papers that mentioned: 6,292

cran: REST

RcmdrPlugin Easy Script Templates
Papers that mentioned: 1,757

cran: vegan

Community Ecology Package
Papers that mentioned: 6,903

pypi: FishTaco

FishTaco: a metagenomic computational framework, aiming to identify the taxa that are driving functional shifts in microbiomes.
Papers that mentioned: 26