Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s13148-020-00931-4

https://doi.org/10.1186/s13148-020-00931-4

TWIST1 DNA methylation is a cell marker of airway and parenchymal lung fibroblasts that are differentially methylated in asthma

Cited by: 7
Author(s): Rachel L. Clifford, Chen Xi Yang, Nick Fishbane, J. Patel, Julia L. MacIsaac, Lisa M. McEwen, Sean May, Marcos Castellanos-Uribe, Parameswaran Nair, Ma’en Obeidat, Michæl S. Kobor, Alan J. Knox, Tillie-Louise Hackett
Published: about 4 years ago

Software Mentions 8

bioconductor: DMRcate
Methylation array and sequencing spatial analysis methods
Papers that mentioned: 132
bioconductor: funtooNorm
Normalization Procedure for Infinium HumanMethylation450 BeadChip Kit
Papers that mentioned: 5
bioconductor: limma
Linear Models for Microarray Data
Papers that mentioned: 7,776
bioconductor: methylGSA
Gene Set Analysis Using the Outcome of Differential Methylation
Papers that mentioned: 11
bioconductor: minfi
Analyze Illumina Infinium DNA methylation arrays
Papers that mentioned: 506
cran: glmnet
Lasso and Elastic-Net Regularized Generalized Linear Models
Papers that mentioned: 1,607
pypi: excel
This package name is reserved by Microsoft Corporation
Papers that mentioned: 2,995
pypi: glmnet
Python wrapper for glmnet
Papers that mentioned: 1,607