Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s13148-019-0651-z

https://doi.org/10.1186/s13148-019-0651-z

Exploring targets of TET2-mediated methylation reprogramming as potential discriminators of prostate cancer progression

Cited by: 18
Author(s): Shivani Kamdar, Ruth Isserlin, Theodorus van der Kwast, Alexandre R. Zlotta, Gary D. Bader, Neil Fleshner, Bharati Bapat
Published: over 5 years ago

Software Mentions 7

bioconductor: DiffBind
Differential Binding Analysis of ChIP-Seq Peak Data
Papers that mentioned: 217
bioconductor: edgeR
Empirical Analysis of Digital Gene Expression Data in R
Papers that mentioned: 6,568
bioconductor: Repitools
Epigenomic tools
Papers that mentioned: 14
cran: epiDisplay
Epidemiological Data Display Package
Papers that mentioned: 37
cran: ROCR
Visualizing the Performance of Scoring Classifiers
Papers that mentioned: 596
pypi: RSeQC
RNA-seq QC Package
Papers that mentioned: 366
pypi: stats
Calculator-style statistical functions
Papers that mentioned: 3,105