Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s13073-020-0720-0

https://doi.org/10.1186/s13073-020-0720-0

A reference profile-free deconvolution method to infer cancer cell-intrinsic subtypes and tumor-type-specific stromal profiles

Cited by: 30
Author(s): Li Wang, Robert Sebra, John P. Sfakianos, Kimaada Allette, Wenhui Wang, Seungyeul Yoo, Nina Bhardwaj, Eric E. Schadt, Xin Yao, Matthew D. Galsky, Jun Zhu
Published: over 4 years ago

Software Mentions 4

bioconductor: DeMixT
Cell type-specific deconvolution of heterogeneous tumor samples with two or three components using expression data from RNAseq or microarray platforms
Papers that mentioned: 5
cran: ISOpureR
Deconvolution of Tumour Profiles
Papers that mentioned: 4
cran: Seurat
Tools for Single Cell Genomics
Papers that mentioned: 1,512
pypi: tr
tr
Papers that mentioned: 1