An open API service providing mapping between scientific papers and software projects that are mentioned in them.

Papers: 10.1186/s13073-020-00747-0

https://doi.org/10.1186/s13073-020-00747-0

Strain-resolved microbiome sequencing reveals mobile elements that drive bacterial competition on a clinical timescale

Cited by: 37
Author(s): Soumaya Zlitni, Alex Bishara, Eli L. Moss, Е. И. Ткаченко, Joyce B. Kang, Rebecca Culver, Tessa M. Andermann, Ziming Weng, Christina M. Wood, Christine Handy, Hanlee P. Ji, Serafim Batzoglou, Ami S. Bhatt
Published: about 5 years ago

Software Mentions 5

cran: circlize
Circular Visualization
Papers that mentioned: 260
Very Likely Science (100)
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
Very Likely Science (100)
cran: STAR
Spike Train Analysis with R
Papers that mentioned: 5,759
Very Likely Science (100)
pypi: cutadapt
Adapter trimming and other preprocessing of high-throughput sequencing reads
Papers that mentioned: 1,562
Very Likely Science (100)
pypi: matplotlib
Python plotting package
Papers that mentioned: 1,045
Very Likely Science (100)