Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Papers: 10.1186/s13072-020-00380-6
https://doi.org/10.1186/s13072-020-00380-6
Cited by: 7
Author(s): Jamie Grit, Benjamin K. Johnson, Patrick S. Dischinger, Curt J. Essenburg, Marie Adams, Stacy Campbell, Kai Pollard, Christine A. Pratilas, Tim Triche, Carrie R. Graveel, Matthew R. Steensma
Published: over 3 years ago
Software Mentions 13
bioconductor: ChAMP
Chip Analysis Methylation Pipeline for Illumina HumanMethylation450 and EPICPapers that mentioned: 208
bioconductor: compartmap
Higher-order chromatin domain inference in single cells from scRNA-seq and scATAC-seqPapers that mentioned: 3
bioconductor: DMRcate
Methylation array and sequencing spatial analysis methodsPapers that mentioned: 132
bioconductor: edgeR
Empirical Analysis of Digital Gene Expression Data in RPapers that mentioned: 6,568
bioconductor: goseq
Gene Ontology analyser for RNA-seq and other length biased dataPapers that mentioned: 132
bioconductor: missMethyl
Analysing Illumina HumanMethylation BeadChip DataPapers that mentioned: 54
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of GraphicsPapers that mentioned: 11,441
cran: glmmTMB
Generalized Linear Mixed Models using Template Model BuilderPapers that mentioned: 373