Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s13068-021-01968-0

https://doi.org/10.1186/s13068-021-01968-0

Evaluation of acidogenesis products’ effect on biogas production performed with metagenomics and isotopic approaches

Cited by: 15
Author(s): Anna Detman, Michał Bucha, Laura Treu, Aleksandra Chojnacka, Łukasz Pleśniak, Agnieszka Salamon, Ewa Łupikasza, Robert Gromadka, Jan Gawor, Agnieszka Gromadka, Wojciech Drzewicki, Marta Jakubiak, Marek Janiga, I. Matyasik, Mieczysław Blaszczyk, Mariusz Orion Jędrysek, Stefano Campanaro, Anna Sikora
Published: over 3 years ago

Software Mentions 2

pypi: hclust2
Hclust2 is a handy tool for plotting heat-maps with several useful options to produce high quality figures that can be used in publication
Papers that mentioned: 11
pypi: MetaPhlAn
MetaPhlAn is a computational tool for profiling the composition of microbial communities (Bacteria, Archaea and Eukaryotes) from metagenomic shotgun sequencing data (i.e. not 16S) with species-level. With the newly added StrainPhlAn module, it is now possible to perform accurate strain-level microbial profiling.
Papers that mentioned: 306