Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s13059-021-02440-w

https://doi.org/10.1186/s13059-021-02440-w

Bedshift: perturbation of genomic interval sets

Cited by: 5
Author(s): Aaron Gu, Hyun-Jae Cho, Nathan C. Sheffield
Published: over 3 years ago

Software Mentions 6

bioconductor: LOLA
Locus overlap analysis for enrichment of genomic ranges
Papers that mentioned: 56
bioconductor: regioneR
Association analysis of genomic regions based on permutation tests
Papers that mentioned: 30
cran: yaml
Methods to Convert R Data to YAML and Back
Papers that mentioned: 14
pypi: bedshift
BED file perturbations
Papers that mentioned: 1
pypi: pyranges
GenomicRanges for Python.
Papers that mentioned: 2
pypi: yaml
Papers that mentioned: 14