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Papers: 10.1186/s13059-021-02440-w

https://doi.org/10.1186/s13059-021-02440-w

Bedshift: perturbation of genomic interval sets

Cited by: 5
Author(s): Aaron Gu, Hyun-Jae Cho, Nathan C. Sheffield
Published: almost 4 years ago

Software Mentions 6

bioconductor: LOLA
Locus overlap analysis for enrichment of genomic ranges
Papers that mentioned: 56
Very Likely Science (100)
bioconductor: regioneR
Association analysis of genomic regions based on permutation tests
Papers that mentioned: 30
Very Likely Science (100)
cran: yaml
Methods to Convert R Data to YAML and Back
Papers that mentioned: 14
Very Likely Science (100)
pypi: bedshift
BED file perturbations
Papers that mentioned: 1
Very Likely Science (80)
pypi: pyranges
GenomicRanges for Python.
Papers that mentioned: 2
Very Likely Science (100)
pypi: yaml
Papers that mentioned: 14
Unlikely Science (0)