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Papers: 10.1186/s13059-021-02341-y

https://doi.org/10.1186/s13059-021-02341-y

PseudotimeDE: inference of differential gene expression along cell pseudotime with well-calibrated p-values from single-cell RNA sequencing data

Cited by: 22
Author(s): Dongyuan Song, Jingyi Jessica Li
Published: about 4 years ago

Software Mentions 5

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
Very Likely Science (100)
bioconductor: NBAMSeq
Negative Binomial Additive Model for RNA-Seq Data
Papers that mentioned: 3
Very Likely Science (100)
bioconductor: tradeSeq
trajectory-based differential expression analysis for sequencing data
Papers that mentioned: 6
Very Likely Science (100)
bioconductor: TSCAN
Tools for Single-Cell Analysis
Papers that mentioned: 49
Very Likely Science (100)
bioconductor: zinbwave
Zero-Inflated Negative Binomial Model for RNA-Seq Data
Papers that mentioned: 12
Very Likely Science (100)