Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s13059-021-02265-7

https://doi.org/10.1186/s13059-021-02265-7

ReSeq simulates realistic Illumina high-throughput sequencing data

Cited by: 7
Author(s): Stephan Schmeing, Mark D. Robinson
Published: almost 4 years ago

Software Mentions 7

cran: ART
Aligned Rank Transform for Nonparametric Factorial Analysis
Papers that mentioned: 580
cran: kmc
Kaplan-Meier Estimator with Constraints for Right Censored Data – a Recursive Computational Algorithm
Papers that mentioned: 8
pypi: bowtie
Interactive Dashboard Toolkit.
Papers that mentioned: 1,566
pypi: bwa
Bwa: Simple Notification Sender(Discord, Slack, Gmail and Telegram)
Papers that mentioned: 989
pypi: perl
Perl as a Python package
Papers that mentioned: 604
pypi: sga
make it easier to use pyga for web develop. and make pyga compatible with flask and django.
Papers that mentioned: 8
pypi: snakemake
Workflow management system to create reproducible and scalable data analyses
Papers that mentioned: 45