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An open API service providing mapping between scientific papers and software projects that are mentioned in them.

Papers: 10.1186/s13059-021-02263-9

https://doi.org/10.1186/s13059-021-02263-9

Optimized RNA-targeting CRISPR/Cas13d technology outperforms shRNA in identifying functional circRNAs

Cited by: 62
Author(s): Yang Zhang, Tuan M. Nguyen, Xiao‐Ou Zhang, Limei Wang, Tin Phan, John G. Clohessy, Pier Paolo Pandolfi
Published: over 4 years ago

Software Mentions 5

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
Very Likely Science (100)
bioconductor: fgsea
Fast Gene Set Enrichment Analysis
Papers that mentioned: 150
Very Likely Science (100)
cran: STAR
Spike Train Analysis with R
Papers that mentioned: 5,759
Very Likely Science (100)
pypi: bowtie
Interactive Dashboard Toolkit.
Papers that mentioned: 1,566
Very Likely Science (90)
pypi: CIRCexplorer2
Circular RNA analysis toolkits
Papers that mentioned: 79
Very Likely Science (100)