Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s13059-020-02223-9

https://doi.org/10.1186/s13059-020-02223-9

Equivalent DNA methylation variation between monozygotic co-twins and unrelated individuals reveals universal epigenetic inter-individual dissimilarity

Cited by: 17
Author(s): Benjamin Planterose Jiménez, Fan Liu, Amke Caliebe, Diego Montiel González, Jordana T. Bell, Manfred Kayser, Athina Vidaki
Published: almost 4 years ago

Software Mentions 8

bioconductor: ArrayExpress
Access the ArrayExpress Collection at EMBL-EBI Biostudies and build Bioconductor data structures: ExpressionSet, AffyBatch, NChannelSet
Papers that mentioned: 1,962
bioconductor: ENmix
Quality control and analysis tools for Illumina DNA methylation BeadChip
Papers that mentioned: 27
bioconductor: GEOquery
Get data from NCBI Gene Expression Omnibus (GEO)
Papers that mentioned: 328
bioconductor: minfi
Analyze Illumina Infinium DNA methylation arrays
Papers that mentioned: 506
bioconductor: missMethyl
Analysing Illumina HumanMethylation BeadChip Data
Papers that mentioned: 54
bioconductor: wateRmelon
Illumina 450 and EPIC methylation array normalization and metrics
Papers that mentioned: 108
cran: fasta
Fast Adaptive Shrinkage/Thresholding Algorithm
Papers that mentioned: 848
pypi: fasta
The fasta python package enables you to deal with biological sequence files easily.
Papers that mentioned: 848