Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Papers: 10.1186/s13059-020-02116-x
https://doi.org/10.1186/s13059-020-02116-x
Cited by: 107
Author(s): Chenfei Wang, Dongqing Sun, Xin Huang, Changxin Wan, Ziyi Li, Ya Han, Qian Qin, Jingyu Fan, Xintao Qiu, Yingtian Xie, Clifford A. Meyer, Myles Brown, Ming Tang, Henry W. Long, Tao Liu, X. Shirley Liu
Published: almost 4 years ago
Software Mentions 15
bioconductor: cicero
Predict cis-co-accessibility from single-cell chromatin accessibility dataPapers that mentioned: 2
bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distributionPapers that mentioned: 9,583
bioconductor: scmap
A tool for unsupervised projection of single cell RNA-seq dataPapers that mentioned: 34
cran: aricode
Efficient Computations of Standard Clustering Comparison MeasuresPapers that mentioned: 3
cran: uwot
The Uniform Manifold Approximation and Projection (UMAP) Method for Dimensionality ReductionPapers that mentioned: 17
pypi: Cython
The Cython compiler for writing C extensions in the Python language.Papers that mentioned: 118