Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s13059-020-01996-3

https://doi.org/10.1186/s13059-020-01996-3

Insights gained from a comprehensive all-against-all transcription factor binding motif benchmarking study

Cited by: 37
Author(s): Giovanna Ambrosini, Ilya E. Vorontsov, Dmitry Penzar, Romain Groux, Oriol Fornés, Daria D. Nikolaeva, Benoît Ballester, Jan Grau, Ivo Große, Vsevolod J. Makeev, Ivan V. Kulakovskiy, Philipp Bücher
Published: over 4 years ago

Software Mentions 3

bioconductor: SELEX
Functions for analyzing SELEX-seq data
Papers that mentioned: 80
cran: JASPAR
R modules for JASPAR databases: a collection of transcription factor DNA-binding preferences, modeled as matrices
Papers that mentioned: 1,283
pypi: sklearn
deprecated sklearn package, use scikit-learn instead
Papers that mentioned: 559