Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s13059-019-1721-4

https://doi.org/10.1186/s13059-019-1721-4

Chromatin accessibility plays a key role in selective targeting of Hox proteins

Cited by: 35
Author(s): Damiano Porcelli, Bettina Fischer, Steven Russell, Robert A. White
Published: over 5 years ago

Software Mentions 5

bioconductor: Biostrings
Efficient manipulation of biological strings
Papers that mentioned: 220
bioconductor: PWMEnrich
PWM enrichment analysis
Papers that mentioned: 16
cran: JASPAR
R modules for JASPAR databases: a collection of transcription factor DNA-binding preferences, modeled as matrices
Papers that mentioned: 1,283
pypi: bowtie
Interactive Dashboard Toolkit.
Papers that mentioned: 1,566
pypi: MACS2
Model Based Analysis for ChIP-Seq data
Papers that mentioned: 1,203