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Papers: 10.1186/s13059-019-1674-7

https://doi.org/10.1186/s13059-019-1674-7

Topconfects: a package for confident effect sizes in differential expression analysis provides a more biologically useful ranked gene list

Cited by: 38
Author(s): Paul F. Harrison, Andrew Pattison, David Powell, Traude H. Beilharz
Published: over 6 years ago

Software Mentions 5

bioconductor: apeglm
Approximate posterior estimation for GLM coefficients
Papers that mentioned: 41
Very Likely Science (98)
bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
Very Likely Science (100)
bioconductor: fgsea
Fast Gene Set Enrichment Analysis
Papers that mentioned: 150
Very Likely Science (100)
bioconductor: limma
Linear Models for Microarray Data
Papers that mentioned: 7,776
Very Likely Science (78)
cran: ashr
Methods for Adaptive Shrinkage, using Empirical Bayes
Papers that mentioned: 12
Very Likely Science (100)