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Papers: 10.1186/s13059-019-1664-9

https://doi.org/10.1186/s13059-019-1664-9

RnBeads 2.0: comprehensive analysis of DNA methylation data

Cited by: 188
Author(s): Fabian Müller, Michael Scherer, Yassen Assenov, Pavlo Lutsik, Jörn Walter, Thomas Lengauer, Christoph Bock
Published: over 6 years ago

Software Mentions 8

bioconductor: ChAMP
Chip Analysis Methylation Pipeline for Illumina HumanMethylation450 and EPIC
Papers that mentioned: 208
Very Likely Science (100)
bioconductor: LOLA
Locus overlap analysis for enrichment of genomic ranges
Papers that mentioned: 56
Very Likely Science (100)
bioconductor: methylKit
DNA methylation analysis from high-throughput bisulfite sequencing results
Papers that mentioned: 154
Very Likely Science (75)
bioconductor: methylumi
Handle Illumina methylation data
Papers that mentioned: 75
Very Likely Science (100)
bioconductor: minfi
Analyze Illumina Infinium DNA methylation arrays
Papers that mentioned: 506
Very Likely Science (100)
bioconductor: RnBeads
RnBeads
Papers that mentioned: 145
Very Likely Science (90)
bioconductor: wateRmelon
Illumina 450 and EPIC methylation array normalization and metrics
Papers that mentioned: 108
Very Likely Science (98)
cran: doParallel
Foreach Parallel Adaptor for the 'parallel' Package
Papers that mentioned: 90
Very Likely Science (75)