Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s13059-019-1639-x

https://doi.org/10.1186/s13059-019-1639-x

CellFishing.jl: an ultrafast and scalable cell search method for single-cell RNA sequencing

Cited by: 23
Author(s): K. Sato, Koki Tsuyuzaki, Kentaro Shimizu, Itoshi Nikaido
Published: almost 6 years ago

Software Mentions 7

bioconductor: scater
Single-Cell Analysis Toolkit for Gene Expression Data in R
Papers that mentioned: 79
bioconductor: scmap
A tool for unsupervised projection of single cell RNA-seq data
Papers that mentioned: 34
cran: Julia
Fractal Image Data Generator
Papers that mentioned: 304
cran: mmap
Map Pages of Memory
Papers that mentioned: 9
pypi: cellfinder
Automated 3D cell detection and registration of whole-brain images
Papers that mentioned: 4
pypi: jl
Library for parsing JSON lines.
Papers that mentioned: 10
pypi: scmap
Assigns rgb colors to points on sphere.
Papers that mentioned: 34