Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s13059-018-1432-2

https://doi.org/10.1186/s13059-018-1432-2

FOCS: a novel method for analyzing enhancer and gene activity patterns infers an extensive enhancer–promoter map

Cited by: 57
Author(s): Tom Aharon Hait, David Amar, Ron Shamir, Ran Elkon
Published: over 6 years ago

Software Mentions 10

bioconductor: GenomicInteractions
Utilities for handling genomic interaction data
Papers that mentioned: 10
bioconductor: GenomicRanges
Representation and manipulation of genomic intervals
Papers that mentioned: 323
bioconductor: rtracklayer
R interface to genome annotation files and the UCSC genome browser
Papers that mentioned: 107
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: gplots
Various R Programming Tools for Plotting Data
Papers that mentioned: 2,122
cran: pscl
Political Science Computational Laboratory
Papers that mentioned: 185
pypi: enet
Enet library bindings for Python.
Papers that mentioned: 1
pypi: graphics
A console based graphics engine for simple Unicode games and animations.
Papers that mentioned: 126
pypi: Origami
Lightweight bit packing for classes
Papers that mentioned: 64
pypi: utils
A grab-bag of utility functions and objects
Papers that mentioned: 35