Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s13059-018-1406-4

https://doi.org/10.1186/s13059-018-1406-4

Observation weights unlock bulk RNA-seq tools for zero inflation and single-cell applications

Cited by: 159
Author(s): Koen Van den Berge, Fanny Perraudeau, Charlotte Soneson, Michael I. Love, Davide Risso, Jean-Philippe Vert, Mark D. Robinson, Sandrine Dudoit
Published: over 6 years ago

Software Mentions 4

bioconductor: countsimQC
Compare Characteristic Features of Count Data Sets
Papers that mentioned: 6
bioconductor: fgsea
Fast Gene Set Enrichment Analysis
Papers that mentioned: 150
bioconductor: MAST
Model-based Analysis of Single Cell Transcriptomics
Papers that mentioned: 668
pypi: MAST
MAterials Simulation Toolkit
Papers that mentioned: 668