An open API service providing mapping between scientific papers and software projects that are mentioned in them.

Papers: 10.1186/s13059-017-1321-0

https://doi.org/10.1186/s13059-017-1321-0

The nuclear receptor ERβ engages AGO2 in regulation of gene transcription, RNA splicing and RISC loading

Cited by: 55
Author(s): Roberta Tarallo, Giorgio Giurato, Giuseppina Bruno, Maria Ravo, Francesca Rizzo, Annamaria Salvati, Luca Ricciardi, Giovanna Marchese, Angela Cordella, Teresa Rocco, Valerio Gigantino, Biancamaria Pierri, Giovanni Cimmino, Luciano Milanesi, Concetta Ambrosino, Tuula A. Nyman, Giovanni Nassa, Alessandro Weisz
Published: almost 8 years ago

Software Mentions 6

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
Very Likely Science (100)
cran: Andromeda
Asynchronous Disk-Based Representation of Massive Data
Papers that mentioned: 1,724
Very Likely Science (85)
pypi: bowtie
Interactive Dashboard Toolkit.
Papers that mentioned: 1,566
Very Likely Science (90)
pypi: HTSeq
A framework to process and analyze data from high-throughput sequencing (HTS) assays
Papers that mentioned: 3,071
Very Likely Science (65)
pypi: MACS2
Model Based Analysis for ChIP-Seq data
Papers that mentioned: 1,203
Very Likely Science (100)
pypi: TopHat
TopHat Platform
Papers that mentioned: 5,017
Very Likely Science (90)