Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s13059-017-1321-0

https://doi.org/10.1186/s13059-017-1321-0

The nuclear receptor ERβ engages AGO2 in regulation of gene transcription, RNA splicing and RISC loading

Cited by: 55
Author(s): Roberta Tarallo, Giorgio Giurato, Giuseppina Bruno, Maria Ravo, Francesca Rizzo, Annamaria Salvati, Luca Ricciardi, Giovanna Marchese, Angela Cordella, Teresa Rocco, Valerio Gigantino, Biancamaria Pierri, Giovanni Cimmino, Luciano Milanesi, Concetta Ambrosino, Tuula A. Nyman, Giovanni Nassa, Alessandro Weisz
Published: about 7 years ago

Software Mentions 6

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
cran: Andromeda
Asynchronous Disk-Based Representation of Massive Data
Papers that mentioned: 1,724
pypi: bowtie
Interactive Dashboard Toolkit.
Papers that mentioned: 1,566
pypi: HTSeq
A framework to process and analyze data from high-throughput sequencing (HTS) assays
Papers that mentioned: 3,071
pypi: MACS2
Model Based Analysis for ChIP-Seq data
Papers that mentioned: 1,203
pypi: TopHat
TopHat Platform
Papers that mentioned: 5,017