Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Papers: 10.1186/s13059-017-1165-7
https://doi.org/10.1186/s13059-017-1165-7
BaalChIP: Bayesian analysis of allele-specific transcription factor binding in cancer genomes
Cited by: 20
Author(s): Inês de Santiago, Wei Liu, Ke Yuan, Martin O’Reilly, Chandra Sekhar Reddy Chilamakuri, Bruce A.J. Ponder, Kerstin B. Meyer, Florian Markowetz
Published: over 7 years ago
Software Mentions 6
bioconductor: BaalChIP
BaalChIP: Bayesian analysis of allele-specific transcription factor binding in cancer genomesPapers that mentioned: 1
bioconductor: GenomicRanges
Representation and manipulation of genomic intervalsPapers that mentioned: 323
bioconductor: iASeq
iASeq: integrating multiple sequencing datasets for detecting allele-specific eventsPapers that mentioned: 4
bioconductor: Rsamtools
Binary alignment (BAM), FASTA, variant call (BCF), and tabix file importPapers that mentioned: 138